First thing you have to do is make sure that you have no blockage in any drainage tubes that are supposed to route water out of the HVAC systems. Then you can purchase a bottle of duct cleaner (for lack of remembering what it is acutally called) that will spray into the ducting and kill any fungus and odors that lurch there. Though I have not done this operation on my PT I did have to do it on my last mustang. It takes a few days for it to work completely but it does work. I bought a bottle from Ford that didn't really work so I bought one from Auto Zone that did the job.
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 '03 Inferno Red GT, 5 speed, STAGE 1, Mopar BOV, Plastic Intake, Modified Upper and Lower Airbox, Custom Airbox-to-turbo pipe, Borla dual exhaust, Maddog Short Shifter, Drilled/Slotter Rotors, Ceramic Pads, chrome wheels, chrome door spears, AMP chrome fuel door, PT Cruiser 3rd light diffuser, H&R Springs, Rear Sway Bar added, MGW chrome door lock pulls, Blane's hood struts, Custom license plate mount, some interior dress up stuff...more to come
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